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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9988397_9989201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9988397 - 9989201

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TTCTCTCAGACT

Flanking Amino Acid:

AGHHSYPHCYACSCDSRGAV

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.1

35.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

31.2

-2.1

3.3

40.6

45.1

Minor BPS

49.9

0.08

75.42

41.9

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920