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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9991334_9991506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9991334 - 9991506

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCCCCC

5'SS Class:

major

3'SS Sequence:

CTCTCTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TCTTTATCAATC

Flanking Amino Acid:

PGAYGFPHCEVGSCNPAGLM

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.3

52.5

43.1

Major BPS

0.72

80.3

31.7

Major PPT

83.1

0.74

0.7

76.4

32.2

Minor 5ss

43.3

-0.7

3.2

60.3

44.3

Minor BPS

0.11

1.8

67.17

38.8

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920