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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9994113_9995792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9994113 - 9995792

Intron Length:

1680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCCTG

5'SS Class:

major

3'SS Sequence:

CTCTCTCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGAAG

U12 Branch Point Sequence:

TCTCTCTCCACC

Flanking Amino Acid:

RGYAQMSSIQPKVVVTLNVT

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.8

47.8

Major BPS

46.8

-0.2

1.7

61.4

43.2

Major PPT

73.4

0.53

0.9

66.6

34.3

Minor 5ss

40.4

-1.1

3.3

55.9

48.3

Minor BPS

48.8

-0.1

63.43

42.2

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920