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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9994113_9996220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9994113 - 9996220

Intron Length:

2108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCCTG

5'SS Class:

major

3'SS Sequence:

TTGCTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

TGTGCCCCATGT

Flanking Amino Acid:

RGYAQMSSIQNKIRVTVDVK

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.8

47.8

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

88.4

0.86

0.7

84.2

30.7

Minor 5ss

40.4

-1.1

3.3

55.9

48.3

Minor BPS

40.4

-0.6

2.3

61.66

47.6

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828