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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9996351_9998766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9996351 - 9998766

Intron Length:

2416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGATC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

GATGCCTTCACA

Flanking Amino Acid:

KITAYQPRRRGTEQTKQIVF

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

30.3

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

72.4

0.51

0.8

62.4

33.2

Minor 5ss

36.8

-1.5

3.3

51.2

45.7

Minor BPS

59.7

0.3

1.9

69.3

42.8

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828