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Intron Name: Anas_platyrhynchos_platyrhynchos_21_9998910_9999010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9998910 - 9999010

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GTGTCCCAAATG

Flanking Amino Acid:

LVVEAEGVLLDYLVLLPSSY

Intron Amino Acid Position:

493

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

0.45

0.9

67.6

25.3

Major PPT

80.6

0.69

0.7

73.9

31.2

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

48.1

-0.2

2.1

56.62

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920