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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1207350_1211034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1207350 - 1211034

Intron Length:

3685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTAACA

5'SS Class:

major

3'SS Sequence:

TGTTGTTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

AGGTATGTAACC

Flanking Amino Acid:

PSPFFMDPIYSRVEKRKVTD

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

68.9

35.3

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

77.1

0.61

69.2

46.1

Minor 5ss

39.9

-1.1

2.7

50.5

45.4

Minor BPS

-0.2

2.1

58.21

40.7

Associated Gene:

Gene:

PRDM16

Ensembl Gene ID:

ENSAPLG00000005898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006119

1185327 - 1231074

45748