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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1211123_1214955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1211123 - 1214955

Intron Length:

3833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTACTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGATTTTAATG

Flanking Amino Acid:

RPSPLLFHPQMSAIETMTEK

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.9

73.8

35.8

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

56.6

0.07

1.4

55.88

40.2

Associated Gene:

Gene:

PRDM16

Ensembl Gene ID:

ENSAPLG00000005898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006119

1185327 - 1231074

45748