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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1248007_1248208_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1248007 - 1248208

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGCCA

5'SS Class:

major

3'SS Sequence:

TCTGTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCGAT

U12 Branch Point Sequence:

CTGCCAGGCACT

Flanking Amino Acid:

PGYHGPSCQLECPEGWYGPS

Intron Amino Acid Position:

1232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

59.3

41.4

Major BPS

46.4

-0.2

1.5

43.9

48.6

Major PPT

80.5

0.69

0.9

76.3

37.7

Minor 5ss

25.2

-2.9

22.6

36.9

Minor BPS

36.3

-1

2.5

55.19

46.3

Associated Gene:

Gene:

MEGF6

Ensembl Gene ID:

ENSAPLG00000004881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005080

1247676 - 1322438

74763