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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1249075_1249326_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1249075 - 1249326

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAG

U12 Branch Point Sequence:

CAGTTGTGAGCC

Flanking Amino Acid:

RGWRGRRCEKACLPGSFGKS

Intron Amino Acid Position:

1145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

57.3

0.18

1.7

57.1

49.4

Major PPT

0.52

0.9

66.4

35.7

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

40.6

-0.7

2.2

47.58

42.1

Associated Gene:

Gene:

MEGF6

Ensembl Gene ID:

ENSAPLG00000004881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005080

1247676 - 1322438

74763