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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1260173_1260852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1260173 - 1260852

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CATCCGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TCCCCACTGACC

Flanking Amino Acid:

AGWSGLLCNQTCPAGTFGRS

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

60.3

39.3

Major BPS

61.3

0.28

52.7

34.2

Major PPT

67.5

0.4

0.9

57.6

38.2

Minor 5ss

28.9

-2.4

3.1

36.6

Minor BPS

46.2

-0.3

1.9

57.45

41.2

Associated Gene:

Gene:

MEGF6

Ensembl Gene ID:

ENSAPLG00000004881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005080

1247676 - 1322438

74763