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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1321331_1322352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1321331 - 1322352

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

CAGCTGTGAACT

Flanking Amino Acid:

LASGTKLQPYMPHVCAEPEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

76.1

34.8

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

70.6

0.46

64.4

41.4

Minor 5ss

32.1

-2

2.7

37.9

Minor BPS

44.5

-0.3

2.1

58.88

44.1

Associated Gene:

Gene:

MEGF6

Ensembl Gene ID:

ENSAPLG00000004881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005080

1247676 - 1322438

74763