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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1332666_1332851_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1332666 - 1332851

Intron Length:
186

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAAGCCAG

5'SS Class:
major

3'SS Sequence:
TTTCCACTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTTAT

U12 Branch Point Sequence:
TGTTCAGTAACG

Flanking Amino Acid:
ASSLFSTQSKYDISQVPVSF

Intron Amino Acid Position:
357

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1.1
61.8
44.4

Major BPS
84.1
0.85
0.9
75.3
39.4

Major PPT
84
0.76
0.8
77.9
29.6

Minor 5ss
39.6
-1.2
3.1
52.1
44.8

Minor BPS
54.1
-0
2.3
69.56
43.3

Associated Gene:

Gene:
WRAP73

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1330039 - 1344049
14011

1330374 - 1344049
13676