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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1343391_1343833_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1343391 - 1343833

Intron Length:
443

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTGGGTGCC

5'SS Class:
major

3'SS Sequence:
TGGTTTATCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTTTAT

U12 Branch Point Sequence:
CTTGGTTTATCC

Flanking Amino Acid:
GRISPDGRCLASCVQYRLIV

Intron Amino Acid Position:
73

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1
63.5
36.3

Major BPS
63.5
0.34
1.4
57.4
49.1

Major PPT
74.4
0.55
1
66.3
44

Minor 5ss
27.3
-2.6
3.2
31.8
37.6

Minor BPS
47.4
-0.2
2.1
61.09
45

Associated Gene:

Gene:
WRAP73

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1330039 - 1344049
14011

1330374 - 1344049
13676