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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1350377_1351077_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1350377 - 1351077

Intron Length:
701

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTGGT

5'SS Class:
major

3'SS Sequence:
CACTTTCTCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCATCAC

U12 Branch Point Sequence:
TCTGCCATCACT

Flanking Amino Acid:
GTTFEHLWSTLEPDSTYFDL

Intron Amino Acid Position:
43

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.5
0.58
1.1
69.5
41.3

Major BPS
53.4
0.09
1.1
57.3
37.7

Major PPT
78.7
0.65
0.8
76.5
31.8

Minor 5ss
37.3
-1.4
3.4
59.1
45.4

Minor BPS
52.5
0.16
2.2
76.44
46

Associated Gene:

Gene:
TP73

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1347771 - 1379744
31974

1342818 - 1377882
35065