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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1358420_1371553_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1358420 - 1371553

Intron Length:
13134

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGTTGC

5'SS Class:
major

3'SS Sequence:
TCTTCTTTTCCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GACACAT

U12 Branch Point Sequence:
CTCTGCAGACAC

Flanking Amino Acid:
SSTAKSATWTYSPLLKKLYC

Intron Amino Acid Position:
167

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1
67.3
39.4

Major BPS
52.1
0.05
1.2
61
37.5

Major PPT
91.2
0.93
0.6
84.1
30.8

Minor 5ss
42.7
-0.8
2.8
58.3
40.4

Minor BPS
36.1
-1
2.1
44.94
43.1

Associated Gene:

Gene:
TP73

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1347771 - 1379744
31974

1342818 - 1377882
35065