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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1372378_1372531_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1372378 - 1372531

Intron Length:
154

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGTGGC

5'SS Class:
major

3'SS Sequence:
TCTCTCCTCCCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGCTGAA

U12 Branch Point Sequence:
TGCAGCTGAAGC

Flanking Amino Acid:
ILIIITLEMRDGQVLGRRSF

Intron Amino Acid Position:
304

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1.1
65
40.7

Major BPS
58.2
0.2
1.1
49.1
38

Major PPT
80.9
0.7
0.7
72.9
31.9

Minor 5ss
34.3
-1.8
3.2
40.1
40

Minor BPS
43.5
-0.5
2.1
52.57
44.5

Associated Gene:

Gene:
TP73

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1347771 - 1379744
31974

1342818 - 1377882
35065