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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1389343_1389425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1389343 - 1389425

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAG

U12 Branch Point Sequence:

GCCGCCTGAGCC

Flanking Amino Acid:

SHRATSPSPPGGCRDAPGSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

41.5

Major BPS

44.9

-0.3

1.6

42.9

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

28.6

-2.5

3.7

38.6

46.6

Minor BPS

46.5

-0.2

1.8

51.68

45.2

Associated Gene:

Gene:

CCDC27

Ensembl Gene ID:

ENSAPLG00000003870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003963

1389123 - 1392943

3821