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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1389563_1389691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1389563 - 1389691

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCGTGTTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

GCTGTGTTATGG

Flanking Amino Acid:

LWCVSTVGEKEQSLAALREE

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

65.7

0.35

0.9

57.5

38.6

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

36.6

-1.1

2.3

38.38

45.1

Associated Gene:

Gene:

CCDC27

Ensembl Gene ID:

ENSAPLG00000003870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003963

1389123 - 1392943

3821