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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1390462_1390989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1390462 - 1390989

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCATGG

5'SS Class:

major

3'SS Sequence:

TCCAACGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

GTTTGCTTACAA

Flanking Amino Acid:

NARDDYDLATGVMCSLQRQL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.2

54.5

45.4

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

68.7

0.42

60.3

Minor 5ss

41.8

-0.9

3.2

56.7

47.4

Minor BPS

51.5

0.04

2.1

69.33

42.7

Associated Gene:

Gene:

CCDC27

Ensembl Gene ID:

ENSAPLG00000003870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003963

1389123 - 1392943

3821