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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1391336_1391721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1391336 - 1391721

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATCTG

5'SS Class:

strong_major

3'SS Sequence:

CGTATCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TCTTCCTCACTG

Flanking Amino Acid:

TEKENCSLRQVVTEQESKLA

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

71.2

40.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

0.52

0.9

69.5

36.7

Minor 5ss

31.7

-2.1

40.4

45.7

Minor BPS

54.6

1.9

63.16

45.2

Associated Gene:

Gene:

CCDC27

Ensembl Gene ID:

ENSAPLG00000003870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003963

1389123 - 1392943

3821