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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1406077_1406562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1406077 - 1406562

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTAATCCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATC

Flanking Amino Acid:

PKHIKSKICNAAKPEQVANH

Intron Amino Acid Position:

850

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

84.9

26.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.5

0.62

0.9

73.7

36.5

Minor 5ss

32.1

-2

2.8

39.2

40.5

Minor BPS

66.1

0.48

1.6

78.18

31.2

Associated Gene:

Gene:

CEP104

Ensembl Gene ID:

ENSAPLG00000003555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003652

1403447 - 1417594

14148