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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1407119_1407735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1407119 - 1407735

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTGATATATGT

Flanking Amino Acid:

DHSSVANYLDNLCIFCGERD

Intron Amino Acid Position:

767

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

77.7

33.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.5

0.64

0.7

70.1

30.8

Minor 5ss

41.3

-1

2.8

49.5

41.1

Minor BPS

39.2

-0.7

2.1

58.16

44.7

Associated Gene:

Gene:

CEP104

Ensembl Gene ID:

ENSAPLG00000003555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003652

1403447 - 1417594

14148