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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1415134_1416321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1415134 - 1416321

Intron Length:

1188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

AAATCTATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTTCTTTAAAT

Flanking Amino Acid:

YVNKYNLYSQVALVAINIIG

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

65.6

0.35

55.7

43.4

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

85.3

1.19

1.1

97.3

26.5

Associated Gene:

Gene:

CEP104

Ensembl Gene ID:

ENSAPLG00000003555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003652

1403447 - 1417594

14148