Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_1420848_1421074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1420848 - 1421074

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTATA

5'SS Class:

major

3'SS Sequence:

TTGCATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTGCATTTTACA

Flanking Amino Acid:

ILFSTWNLDHIIEKKRTVVP

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

80.1

34.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

82.1

0.72

0.9

37.6

Minor 5ss

40.3

-1.1

3.1

54.9

42.7

Minor BPS

50.4

1.8

65.66

40.4

Associated Gene:

Gene:

DFFB

Ensembl Gene ID:

ENSAPLG00000003431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003508

1415988 - 1421291

5304