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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1424053_1424091_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1424053 - 1424091

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATT|GCAAAGGAA

5'SS Class:

weak_major

3'SS Sequence:

GGATGTGCTCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTGCAA

U12 Branch Point Sequence:

TGCAAAGGAAGA

Flanking Amino Acid:

RREFRRLHFIQETVKQKPFY

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

54.7

39.4

Major BPS

0.18

1.3

69.4

37.7

Major PPT

57.9

0.18

47.3

45.7

Minor 5ss

20.1

-3.4

4.2

33.4

43.6

Minor BPS

31.7

-1.3

2.2

39.1

Associated Gene:

Gene:

C1orf174

Ensembl Gene ID:

ENSAPLG00000003376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041129

1424008 - 1426537

2530