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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1425211_1425255_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1425211 - 1425255

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCATTCCAG

5'SS Class:

weak_major

3'SS Sequence:

AAGGAACATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

AGGAACATAAAG

Flanking Amino Acid:

CNTTQQKKDENSLKPFAEKS

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.12

1.3

40.5

45.8

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

-0.2

1.1

35.4

38.8

Minor 5ss

34.8

-1.7

46.8

43.1

Minor BPS

42.2

-0.7

1.9

43.34

40.9

Associated Gene:

Gene:

C1orf174

Ensembl Gene ID:

ENSAPLG00000003376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021076

1424053 - 1426125

2073