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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1425986_1426024_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1425986 - 1426024

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGATGCTC

5'SS Class:

weak_major

3'SS Sequence:

GGGCTTACGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

TTGGGTTTACCC

Flanking Amino Acid:

RETNYKQLSADAPPFPPFIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.1

50.4

40.6

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

44.4

-0.3

1.7

47.6

44.8

Minor 5ss

31.2

-2.1

3.4

38.4

40.8

Minor BPS

47.3

-0.2

2.1

61.04

45.1

Associated Gene:

Gene:

C1orf174

Ensembl Gene ID:

ENSAPLG00000003376

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021076

1424053 - 1426125

2073