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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_1467698_1468370_R

Intron Information:

Intron Rank:
141014
Intron Class:
major
Intron Phase:
Intron Coordinates:
1467698 - 1468370
Intron Length:
673

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAGACAA
5'SS Class:
strong_major
3'SS Sequence:
TTTGTGCTTTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
CATTGAT
U12 Branch Point Sequence:
AAAACATTGATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.2
0.95
0.8
76.9
33.7
Major BPS
76.2
0.65
1
67
39.8
Major PPT
84.4
0.77
0.9
81.2
36.5
Minor 5ss
31.3
-2.1
3
38.6
46.4
Minor BPS
50.5
0.1
1.6
65.23
38.7

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000023189
Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000046529
1467105 - 1469148
2044