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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1542815_1555390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1542815 - 1555390

Intron Length:

12576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTCT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

ACTCTCTGATGT

Flanking Amino Acid:

RPPRGLGDTSGLAVHQIITI

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.2

64.2

42.6

Major BPS

0.72

38.9

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

43.8

-0.7

3.4

65.8

45.3

Minor BPS

44.4

-0.3

1.9

60.07

43.4

Associated Gene:

Gene:

AJAP1

Ensembl Gene ID:

ENSAPLG00000003166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003204

1517102 - 1559036

41935