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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1555479_1557494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1555479 - 1557494

Intron Length:

2016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CTCGCCGCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

TTTTCTCTTCCT

Flanking Amino Acid:

ALITTLVLKNCCAQSGTTRR

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.8

41.8

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

63.6

0.31

0.9

53.5

36.6

Minor 5ss

33.5

-1.9

3.4

45.9

43.3

Minor BPS

41.8

-0.5

3.7

80.68

41.1

Associated Gene:

Gene:

AJAP1

Ensembl Gene ID:

ENSAPLG00000003166

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003204

1517102 - 1559036

41935