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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1601569_1616175_F

Intron Information:

Intron Rank:

139862

Intron Class:

major

Intron Phase:

Intron Coordinates:

1601569 - 1616175

Intron Length:

14607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCTCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

CCCCAGTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.3

72.3

40.1

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

100

1.12

0.4

100

Minor 5ss

41.9

-0.9

2.9

57.6

46.6

Minor BPS

46.4

-0.2

2.2

61.76

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035202

1600607 - 1616867

16261