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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1702356_1702430_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1702356 - 1702430

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

TTCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

TCCGGGCTCACT

Flanking Amino Acid:

EASGSTPQRTGRHEQRLQHL

Intron Amino Acid Position:

939

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

63.1

37.1

Major BPS

52.1

0.05

1.3

41.8

Major PPT

78.5

0.64

0.7

73.3

24.9

Minor 5ss

24.5

-2.9

3.3

30.5

42.8

Minor BPS

33.4

-1.2

2.7

51.28

49.1

Associated Gene:

Gene:

NPHP4

Ensembl Gene ID:

ENSAPLG00000002485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046984

1698774 - 1725422

26649

ENSAPLT00000042045

1698774 - 1853266

154493

ENSAPLT00000002520

1698774 - 1725422

26649