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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1705667_1706827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1705667 - 1706827

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGATCT

5'SS Class:

strong_major

3'SS Sequence:

ACATTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCA

Flanking Amino Acid:

QINKDGTPRTGAPGLQLKYM

Intron Amino Acid Position:

715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

31.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.6

0.67

0.9

73.6

36.1

Minor 5ss

35.3

-1.7

3.1

45.7

43.4

Minor BPS

71.9

0.68

1.5

82.41

32.7

Associated Gene:

Gene:

NPHP4

Ensembl Gene ID:

ENSAPLG00000002485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046984

1698774 - 1725422

26649

ENSAPLT00000002520

1698774 - 1725422

26649