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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1707847_1707985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1707847 - 1707985

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCTC

5'SS Class:

major

3'SS Sequence:

GTTTCTCTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TACTGCAGGACT

Flanking Amino Acid:

PIAAVGLPAGSSSTVLSRAS

Intron Amino Acid Position:

588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.9

42.4

Major BPS

71.4

0.53

1.2

63.4

Major PPT

76.1

0.59

69.7

41.5

Minor 5ss

28.5

-2.5

3.6

40.5

Minor BPS

-0.3

2.2

65.9

44.4

Associated Gene:

Gene:

NPHP4

Ensembl Gene ID:

ENSAPLG00000002485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046984

1698774 - 1725422

26649

ENSAPLT00000002520

1698774 - 1725422

26649