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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1709348_1712250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1709348 - 1712250

Intron Length:

2903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTGAGTGTT

5'SS Class:

major

3'SS Sequence:

TGCCTCTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TGATGCTTCATC

Flanking Amino Acid:

ESEKPPTPSLSSPSLLRPAT

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

35.2

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

77.5

0.62

0.8

72.2

32.4

Minor 5ss

34.4

-1.8

3.4

45.6

43.6

Minor BPS

49.2

-0

2.2

63.68

42.1

Associated Gene:

Gene:

NPHP4

Ensembl Gene ID:

ENSAPLG00000002485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046984

1698774 - 1725422

26649

ENSAPLT00000002520

1698774 - 1725422

26649