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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1723656_1724678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1723656 - 1724678

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGAG

5'SS Class:

major

3'SS Sequence:

CCGTGTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGCAG

U12 Branch Point Sequence:

TGCTCCTGTTCT

Flanking Amino Acid:

KYLEGTVVPQQAAGGSAAVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

66.3

39.3

Major BPS

38.6

-0.7

1.6

42.6

40.4

Major PPT

71.3

0.48

64.3

41.5

Minor 5ss

27.9

-2.5

3.5

36.8

47.7

Minor BPS

40.1

-0.6

3.6

69.67

46.6

Associated Gene:

Gene:

NPHP4

Ensembl Gene ID:

ENSAPLG00000002485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002520

1698774 - 1725422

26649

ENSAPLT00000046984

1698774 - 1725422

26649