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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1750939_1751018_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1750939 - 1751018

Intron Length:
80

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAGGTAGC

5'SS Class:
major

3'SS Sequence:
CCTCTTCTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCTGAC

U12 Branch Point Sequence:
GGGCCCTGACCT

Flanking Amino Acid:
VITTKIFWGGKAETERGLSR

Intron Amino Acid Position:
124

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.1
69.9
41.1

Major BPS
56.5
0.16
1.1
48.6
36.6

Major PPT
86.2
0.81
0.7
83.9
24.2

Minor 5ss
36.4
-1.5
3
45.1
37.1

Minor BPS
48.9
-0
1.8
64.33
45.1

Associated Gene:

Gene:
KCNAB2

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1737823 - 1755120
17298

1737823 - 1755120
17298

1737823 - 1755151
17329