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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1760110_1760312_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

1760110 - 1760312

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTACCCTTT

5'SS Class:

weak_minor

3'SS Sequence:

CCTCTGCGCCCAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CTTCCCTTGACG

Flanking Amino Acid:

HDYWLLAGIVTHGYARWQDI

Intron Amino Acid Position:

1685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.5

60.8

46.5

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

65.5

0.35

56.8

38.7

Minor 5ss

69.7

0.66

2.6

80.4

33.2

Minor BPS

72.6

0.57

1.4

72.38

40.5

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339