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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1761247_1761936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1761247 - 1761936

Intron Length:

690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCTCACAG

Flanking Amino Acid:

AEPSPEPLVKDEGIQEKEKP

Intron Amino Acid Position:

1573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

100

1.24

0.5

100

Major PPT

0.79

0.7

79.7

25.9

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

49.9

-0.1

64.47

43.3

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339