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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1762067_1762562_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1762067 - 1762562

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTGG

5'SS Class:

major

3'SS Sequence:

GCTTTACGTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

GATGCTTTACGT

Flanking Amino Acid:

QKPKKVSDSQVPASAEKVES

Intron Amino Acid Position:

1530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

61.3

45.8

Major BPS

69.1

0.47

60.7

37.6

Major PPT

61.8

0.27

1.2

64.7

40.7

Minor 5ss

34.7

-1.7

3.5

46.4

Minor BPS

47.9

-0

65.17

45.5

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339