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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1762961_1764154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1762961 - 1764154

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GCGTCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

CTGTGTTTGACT

Flanking Amino Acid:

IGVMSLVRKKVQEFEHVNGK

Intron Amino Acid Position:

1450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

63.4

0.3

53.7

41.5

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

58.2

0.34

1.8

74.14

43.6

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339