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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1764631_1764827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1764631 - 1764827

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATCACAGTGACA

Flanking Amino Acid:

LLARVGGNIEVLGFNARQRK

Intron Amino Acid Position:

1357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

76.4

32.8

Major BPS

100

1.24

0.5

100

Major PPT

76.3

0.59

0.8

69.7

Minor 5ss

28.3

-2.5

3.6

40.1

46.3

Minor BPS

44.7

-0.4

2.3

58.59

40.8

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339