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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1766146_1767043_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1766146 - 1767043

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAATGTGA

5'SS Class:

major

3'SS Sequence:

TTCTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

AGCCTTTTATCT

Flanking Amino Acid:

QYVVREEDGVEEVEREIIKQ

Intron Amino Acid Position:

1240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

61.2

39.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

36.3

-1.6

3.3

44.5

45.2

Minor BPS

49.9

0.07

1.6

63.79

40.8

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339