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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1767455_1767542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1767455 - 1767542

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TGGGACTCACTC

Flanking Amino Acid:

TEELFKDDVEGMVSQGQRIT

Intron Amino Acid Position:

1140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

38.1

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

85.9

0.81

0.7

80.4

24.8

Minor 5ss

31.6

-2.1

3.2

38.5

46.7

Minor BPS

41.5

-0.6

1.9

47.97

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339