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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1769434_1769994_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1769434 - 1769994

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCATCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GTTGCCTCATCC

Flanking Amino Acid:

GGHRVLIFSQMTKMLDLLED

Intron Amino Acid Position:

982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

76.1

0.59

0.8

69.2

Minor 5ss

35.7

-1.6

48.8

Minor BPS

52.5

0.06

1.9

67.5

43.8

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339