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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1770127_1770327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1770127 - 1770327

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGTGAA

5'SS Class:

major

3'SS Sequence:

AATGTCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

TTTTACTCAAGG

Flanking Amino Acid:

HPYLFPVAAVEAPVLPNGSY

Intron Amino Acid Position:

938

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

70.5

35.4

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

72.6

0.51

0.9

65.3

40.3

Minor 5ss

31.1

-2.2

3.3

36.8

42.9

Minor BPS

54.4

2.1

68.84

44.2

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339