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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1770470_1770713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1770470 - 1770713

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCCACCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

CCATCCCCACCT

Flanking Amino Acid:

IVRVELSQMQKKYYKFILTR

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

66.8

0.38

60.3

35.2

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

44.6

-0.3

2.1

61.61

47.7

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339