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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1771951_1772222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1771951 - 1772222

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

CGTCTTGTAACC

Flanking Amino Acid:

RSGKKVFRMKKEAQIKFHVL

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.65

0.8

69.8

36.7

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

48.1

-0.1

59.48

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339