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Intron Name: Anas_platyrhynchos_platyrhynchos_22_1773191_1773689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1773191 - 1773689

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCACTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTTTCCCGATGA

Flanking Amino Acid:

ENLKLLYWNHRELMLGEDTR

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.4

39.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

75.7

0.58

0.9

72.2

37.7

Minor 5ss

30.6

-2.2

3.5

42.6

44.4

Minor BPS

46.8

-0.2

2.3

69.13

42.9

Associated Gene:

Gene:

CHD5

Ensembl Gene ID:

ENSAPLG00000015475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020685

1758545 - 1791883

33339

ENSAPLT00000016223

1758545 - 1791883

33339